Service ID: V03-SVC-003 Direct Regulatory Service GST Common Portal

GST Annual Return & Reconciliation (GSTR-9 & GSTR-9C)

Multi-point statutory reconciliation of annual outward tax supplies, Input Tax Credit (ITC Table 8 matching), and audited financial statements under Section 44 of the CGST Act, 2017 and Rule 80 of the CGST Rules, 2017. Eliminate departmental audit scrutiny, ITC recovery notices, and Section 47 cumulative late fees.

Statutory Authority

GST Network (GSTN) / CBIC

Mandatory Thresholds

> ₹2 Cr (GSTR-9) | > ₹5 Cr (GSTR-9C)

Statutory Deadline

December 31 (Following Financial Year)

Who Must File & Statutory Thresholds

All regular registered taxpayers registered under the Goods and Services Tax (GST) law must file Form GSTR-9 for every financial year, subject to the following statutory turnover limits prescribed by the Central Board of Indirect Taxes and Customs (CBIC):

  • Turnover up to ₹2 Crores: Optional filing exempted by CBIC notifications for small taxpayers; however, filing is recommended if significant ITC spillover or outward tax adjustments require formal recording.
  • Turnover above ₹2 Crores up to ₹5 Crores: Mandatory filing of Form GSTR-9 (Annual Return). Failure to file attracts automatic daily late fees under Section 47.
  • Turnover above ₹5 Crores: Mandatory filing of both Form GSTR-9 AND Form GSTR-9C (Reconciliation Statement). GSTR-9C is a self-certified reconciliation between the taxpayer's audited annual financials and the GST annual return.
  • Composition Dealers: File Form GSTR-4 (different statutory schedule). Casual taxable persons, input service distributors, and non-resident taxable persons are exempt from GSTR-9.

Scope of Work & Exclusions

Included in Scope

Reconciliation & Filing Inclusions:

  • Comprehensive 3-way reconciliation: GSTR-1 outward supplies vs GSTR-3B tax paid vs audited trial balance/financials.
  • Table 8 Input Tax Credit (ITC) reconciliation: Auto-populated GSTR-2B vs GSTR-3B availed ITC vs purchase registers.
  • Spillover transaction analysis: Adjustments related to previous financial year reported in subsequent periods (April–October).
  • Preparation of Table 4 (Taxable outward supplies), Table 5 (Exempted/nil-rated supplies), and Table 9 (Tax paid).
  • Computation of un-reconciled tax differences and drafting voluntary Form DRC-03 tax payments with interest computation.
  • Preparation of Form GSTR-9C reconciliation tables (audited turnover vs GST return turnover).
  • Final upload, JSON compilation, pre-validation, and submission with Authorized Signatory DSC/EVC.
Exclusions & Separate Engagements

Exclusions & Contentious Proceedings:

  • Financial Statement Audit: Statutory company or tax audit (Form 3CA/3CD) must be completed by your independent auditor before GSTR-9C compilation.
  • GST Departmental Litigation: Responding to formal Section 73 or 74 Show Cause Notices (SCN), summons, or departmental audits (GST ADT-01) is billed separately.
  • GST Appellate Representation: Formal appeals before the First Appellate Authority or GST Appellate Tribunal (GSTAT) are handled by independent legal counsel.
  • Government Tax & Late Fee Payments: Additional tax dues or interest computed under DRC-03 are paid directly by the client on the portal.

Required Documents & Financial Information

1. Monthly GST Returns (April–March)

  • All 12 filed Form GSTR-1 returns and summary statements.
  • All 12 filed Form GSTR-3B tax payment returns.
  • Subsequent monthly returns (April to October of following FY) for spillover tracking.
  • Auto-populated GSTR-2B annual statement download.

2. Audited Accounting Records

  • Audited Balance Sheet and Statement of Profit & Loss.
  • Audited Trial Balance (detailed ledger level).
  • Sales and purchase registers with HSN/SAC-wise summaries.
  • Tax audit report (Form 3CD with Clause 44 breakup if applicable).

3. Credentials & Signing Tokens

  • GST Common Portal login credentials.
  • Active Digital Signature Certificate (DSC Class 3) of Authorized Signatory (mandatory for Companies/LLPs).
  • EVC mobile OTP access (for Proprietorships/Partnerships).

Reconciliation Process & Realistic Timelines

1
Data Ingestion & 3-Way Reconciliation (Days 1–5)

Extracting GSTR-1, GSTR-3B, and GSTR-2B datasets from the GST portal and performing invoice-level reconciliation against audited sales and purchase ledgers.

2
Variance Analysis & Tax Liability Determination (Days 6–8)

Identifying un-reconciled differences, ineligible ITC reversals under Rule 38/42/43, and drafting voluntary DRC-03 tax payments with applicable Section 50 interest.

3
Draft Review & Client Sign-off (Days 9–10)

Sharing draft GSTR-9 and GSTR-9C reconciliation statements with management and internal finance teams for review, adjustments, and sign-off.

4
Portal Upload, Pre-Validation & Submission (Days 11–12)

Final JSON schema validation, offline tool compilation, uploading to the GST Common Portal, and verification with Authorized Signatory DSC.

Transparent Professional Fee Structure

GSTR-9 Annual Return

For enterprises with aggregate annual turnover between ₹2 Crores and ₹5 Crores.

₹12,999 + Taxes
  • GSTR-1 vs GSTR-3B Outward Supply Reconciliation
  • GSTR-2B vs Books Table 8 ITC Matching
  • Spillover Credit & Adjustment Analysis
  • Form GSTR-9 Annual Return E-Filing
  • DRC-03 Voluntary Tax Advice & Interest Computation
Initiate Tax Consultation

Section 47 Statutory Late Fee Note: If GSTR-9 is filed after December 31, late fees are automatically levied under Section 47 of the CGST Act: ₹50/day (₹25 CGST + ₹25 SGST) for turnover up to ₹5 Crores; ₹100/day for turnover between ₹5–20 Crores; ₹200/day for turnover > ₹20 Crores, capped at 0.04% of state turnover.

Relevant Diagnostic Tools & Related Services

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Corporate GST Compliance Desk

Initiate GSTR-9 / 9C Annual Reconciliation

Submit your business GSTIN and approximate annual turnover for a preliminary reconciliation assessment.

Reviewed by corporate tax and compliance professionals during business hours (Mon–Sat, 9AM–7PM IST). Protected under our Confidentiality Policy.

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Statutory Notice & Professional Boundaries: CraftEgon CCS provides corporate tax preparation, reconciliation, and regulatory e-filing management under the Central Goods and Services Tax Act, 2017. We do not provide courtroom advocacy or contentious litigation representation; appeals before the GST Appellate Tribunal (GSTAT) or High Courts must be handled by an independent advocate enrolled under the Advocates Act, 1961.